Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015830267.1_cds_XP_016504103.1_17583
CDS Infomation

[gene=LOC107822115] [db_xref=GeneID:107822115] [protein=probable serine/threonine-protein kinase At5g41260] [protein_id=XP_016504103.1] [location=complement(join(2557..2799,2999..3112,3752..3916,4316..4504,4609..4694,4874..4979,5067..5200,5414..5549,5665..5885,5972..6053))] [gbkey=CDS]
Sequence

ATGGGTGCTCGTTGCTCAAAATTCTCTTTTTGCTGGTGGCATTCTCATCTCAAACCATCC
CTTCTTGATTCTTCTGATTTGGAGAATGGAGGGAAGAATGAGAAAAATGCATTGCCAAGT
TTTACTGAGTTCAGTCTTGATGAGCTAAAGATTGCTACAAATGGATTTTCTCCAGAAAAC
ATAGTATCAGAACATGGTGAAAAAGCTCCAAATGTAGTTTATAAAGGCTTGCTTGAAAAT
GGTCGTTGGGTTGCTGTTAAAAGATTCAATAGGTCTGCTTGGCCTGATTCTCGCCAATTC
TTGGATGAGGCAAAGGCAGTGGGGAATCTGAGAAGTGAGAGATTGGCAAATCTAATTGGA
TGTTGTTGTGAAGGAGAAGAAAAATTGCTGGTGGCTGAGTTCATGCCTAATGAAACTCTT
GCAAAGCATTTGTTTCACTGGGAGAATCAACCTATGAAATGGGCGATGAGGTTGAGGGTT
GCTTTTTACCTATCACAAGCTTTGGAATACTGCAGTAGCAAGGGTCGGGCACTATATCAC
GATCTTAATGCTTACAGAATCTTATTTGATCTGGATGGTAATCCTAGACTCTCTTGCTTT
GGCCTGATGAAGAACAGTAGGGATGGAAAGAGTTACAGTACAAACTTGGCTTTCACTCCC
CCCGAGTACTTGAAAACAGGAAGAGTGACCCCTGAAAGTGTAGTTTACAGCTTTGGAACA
ATGTTGCTAGATCTTTTGAGCGGAAAGCATATTCCTCCGAGCCACGCACTTGATTTAATT
CGTGGGAAGAATTTTTTGATGCTTATGGATTCTTGTTTGGAGGGTCATTTTTCTAATGAT
GATGGAACAGAGCTTGTTCGGCTAGCCACACGTTGTTTACAGTATGAAGCACGTGAGAGG
CCTAACGCAAAATCTCTTGTTACTTCTCTTATGTCTCTTCAGAAAGAAACAGAGGTGCCA
TCACATGTTTTGCTGGGCATTCCACATGGAACTGCAACCCCACCTCAACCGCTATTGTTG
ACCCCAATGGGTGAAGCATGTTTGAGAAAAGATCTTACTGCCCTTCATGAAATATTGGAG
AAGACTGGATACAAGGATGATGAAGGAATTGCCAATGAGCTTTCATTCCAAATGTGGACA
AATCAGATGCAGGAAACCTTGAATTCTAAGAAGCATGGTGATGCTGCTTTTCGAGCCAAG
GATTTCATTACTGCCATTGACTGCTATACACAGTTCATTGATGGAGGGACCATGGTATCA
CCAACAGTATTTGCGAGGCGTTGCTTGTGTTATCTGATGAGCGACATGCCACAAGAGGCT
CTAGGGGATGCAATGCAAGCTCAGGTGGTTTTCGCTGAGTGGCCAACTGCCTTTTACCTC
CAAGCTGCTGGCCTCTTTATCCTTGGGATTGAGAATGATGCCCAAGAAGCTCTTAAAGAA
GCTACAAAGTTGGAAGCAAAAAGGAGCAAAAACTGA

Peptide Sequence

PEP ID

XP_016504103.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At5g41260 [Nicotiana tabacum]
Sequence

MGARCSKFSFCWWHSHLKPSLLDSSDLENGGKNEKNALPSFTEFSLDELKIATNGFSPEN
IVSEHGEKAPNVVYKGLLENGRWVAVKRFNRSAWPDSRQFLDEAKAVGNLRSERLANLIG
CCCEGEEKLLVAEFMPNETLAKHLFHWENQPMKWAMRLRVAFYLSQALEYCSSKGRALYH
DLNAYRILFDLDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLKTGRVTPESVVYSFGT
MLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLATRCLQYEARER
PNAKSLVTSLMSLQKETEVPSHVLLGIPHGTATPPQPLLLTPMGEACLRKDLTALHEILE
KTGYKDDEGIANELSFQMWTNQMQETLNSKKHGDAAFRAKDFITAIDCYTQFIDGGTMVS
PTVFARRCLCYLMSDMPQEALGDAMQAQVVFAEWPTAFYLQAAGLFILGIENDAQEALKE
ATKLEAKRSKN

Transcript Sequence

Gene sequence data has not been registered.